CDS

Accession Number TCMCG017C10925
gbkey CDS
Protein Id OMP00400.1
Location complement(join(23072..23100,23245..23464,23593..23811,24286..24546,24874..25038,25335..25361,25441..25635,25808..25912,26167..26370,26597..26674,27108..27395,27715..28155))
GeneID InterPro:IPR001371
Organism Corchorus olitorius
locus_tag COLO4_12709

Protein

Length 743aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01014940.1
Definition Glycoside hydrolase, family 14B, plant [Corchorus olitorius]
Locus_tag COLO4_12709

EGGNOG-MAPPER Annotation

COG_category G
Description beta-amylase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R02112        [VIEW IN KEGG]
R11262        [VIEW IN KEGG]
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01177        [VIEW IN KEGG]
EC 3.2.1.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00500        [VIEW IN KEGG]
map00500        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004553        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016160        [VIEW IN EMBL-EBI]
GO:0016161        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAACAGATATGCAGAAGCTGTTAGGAACTAGTGAGGAAGATGATGAAGAGGAAATTGAAATGGATGTAAAAGAGGAGGATGATGAGGATGAGGAGAATGGAGAGAAGCATATTACTGCACAGATGATGATGGGGGTTGATGGAGTGATGCCAAGTCCAAGTAGTACTGGGCAGTATCAGCAGCAACTTCAAGAGCAAGTCAGCACCCCAGGGGGAGGAGGAGCTCGGAGGTCACGACCTCTAGAAGAAAAAGAGCGAACAAAGCTAAGGGAGCGACATCGGAGAGCAATAACTGCTAGGATCTTGGCAGGGCTGCGAAGACATGGGAATTATAACCTGAGGGTTAGAGCTGATATCAATGATGTAATTGCAGCTTTGGCCAGGGAAGCTGGTTGGGTTGTTCTTCCAGATGGAACCACTTTTCCATCAAGATCCCAGGGTTCAAGGCCTGCTGGTGGCACATCTGCTGGCATGACTTCATCCTCCTCTCAAATGGTATCACAACAGACTCCGCCTTCCTCCCTGCGGGGTATTTCTTCTGGCTATCGCACCTCAGTAGAGTACAATGCTTGTCGTATGAAGGGTGTTTTCATGCCTACTCCTTCACCTTATGATTTATCCTCCAGTGCCCGTTCTCAAAGTCCAGGCATGGTGGGAGATGGTGGAGAACAAACAGATAGTCTTCCTCTTATTGCTGGTTCCATGGAAGTGGTTAATGACAAGCAGATTATGGAACTACATCCTAAGTTACCAGAACGTGATTTTGCCGGCACTCCATATGTTCCAGTTTATGTGATGCTACCATTGGGGGTCATCAATATGAAGTGTGAGCTAGTTGATCCAGATGGTCTGTTAAAGCAGCTAAGAGTATTGAAATCAATCAATGTGGATGGGGTTATGGTTGACTGCTGGTGGGGAATAGTGGAAGCACATGCCCCTCAGGAGTATAACTGGAATGGTTACCGAAGACTCTTTCAGATGGTTCGTGAGCTTAAGCTTAAGTTGCAGATGTCAGACTTGGCCTGTGCCACTGCGTGGCAGAGTATTATGCTTTGGACTAAGAATGCAGTGATGCAATTTGTGAATAAAAAACACCTATGTCTTCCTGTCAAGGTTGTGATGTCGTTTCATGAATGTGGTGGCAATGTCGGTGATGATGCTTGTATTCCTCTTCCCCACTGGGTTGCAGAAATTGGTAGAAGTAATCCTGACATATTTTTTACTGATAGAGAAGGAAGAAGAAACCCTGAATGCCTCTCGTGGGGAATTGACAAGGAACGAGTTTTAAAGGGCCGAACTGCTGTTGAGGTAAAGCGAATTGCAGACTTCATTGCAGTATACTTTGACTATATGAGAAGCTTCCGTGTGGAATTTGATGAATTCTTTGAGGATGGCATCATATCTATGGTTGAGATTGGACTAGGTCCTTGTGGGGAGCTACGATACCCATCTTGTCCAGTAAAGCATGGATGGAGGTATCCAGGGATTGGGGAGTTCCAGTGTTATGATCAATATATGCTGAAAAGTCTAAGGAAGGCAGCAGAAATGAGGGGACACAGCTTTTGGGCTAGAGGGCCAGATAATGCTGGGTCCTATAATTCCCAGCCCCACGAAACCGGGTTCTTTTGTGACGGAGGAGACTATGATGGTTATTATGGTCGGTTTTTTCTTAATTGGTACTCTCGTGTATTAGTTGATCATGGAGACCGGGTACTCTCTCTGGCAAAGTTAGCTTTTGAAGGCACTTGCATCGCAGCAAAGCTGCCAGGTATTCACTGGTGGTATAAAACAGCTAGTCATGCTGCTGAATTAACTGCTGGATTCTACAATCCCTCCAATCGTGATGGCTATTCTCCAATAGCAGCTATGCTACAGAAGCATGGAGCTTCTTTAAACTTTGCTTGTGCTGAACTGCATTTATTGGAGCAGCATGAGGACTTGCGGGAAGCACTGGCAGATCCTCAGGGTTTAGTCTGGCAGGTGCTGAATGCTGCATGGGATGTTTGCATTCCAGTTGCAACTGAAAATGCTCTTCTTTGCTATGATAGGGTAGGCTATAACAGGATATTGGACAATGTCAAGCCTTTAAATGATCCAGATGGGAGACATTTTTCATCTTTTACTTACCTTAGGCTCAGCCCACTTCTCATGGAGAGACAGAATTTCATGGAATTTGAACGGTTTGTCAAGCGAATGCATGGGGAAGCCGTTCTAGATATCCAGGTATAG
Protein:  
MATDMQKLLGTSEEDDEEEIEMDVKEEDDEDEENGEKHITAQMMMGVDGVMPSPSSTGQYQQQLQEQVSTPGGGGARRSRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGSRPAGGTSAGMTSSSSQMVSQQTPPSSLRGISSGYRTSVEYNACRMKGVFMPTPSPYDLSSSARSQSPGMVGDGGEQTDSLPLIAGSMEVVNDKQIMELHPKLPERDFAGTPYVPVYVMLPLGVINMKCELVDPDGLLKQLRVLKSINVDGVMVDCWWGIVEAHAPQEYNWNGYRRLFQMVRELKLKLQMSDLACATAWQSIMLWTKNAVMQFVNKKHLCLPVKVVMSFHECGGNVGDDACIPLPHWVAEIGRSNPDIFFTDREGRRNPECLSWGIDKERVLKGRTAVEVKRIADFIAVYFDYMRSFRVEFDEFFEDGIISMVEIGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYMLKSLRKAAEMRGHSFWARGPDNAGSYNSQPHETGFFCDGGDYDGYYGRFFLNWYSRVLVDHGDRVLSLAKLAFEGTCIAAKLPGIHWWYKTASHAAELTAGFYNPSNRDGYSPIAAMLQKHGASLNFACAELHLLEQHEDLREALADPQGLVWQVLNAAWDVCIPVATENALLCYDRVGYNRILDNVKPLNDPDGRHFSSFTYLRLSPLLMERQNFMEFERFVKRMHGEAVLDIQV